Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926256.1_cds_XP_016474333.1_66370
CDS Infomation

[gene=LOC107796113] [db_xref=GeneID:107796113] [protein=probable protein phosphatase 2C 3 isoform X2] [protein_id=XP_016474333.1] [location=join(25476..25532,25980..26151,26261..26414,26497..26560,26653..26760,26849..26974,27335..27567,28544..28763)] [gbkey=CDS]
Sequence

ATGAAAAAATGGAGAAGCCAACTGTTAGATATGGATGTGCAGCTCAGTCCAAGAAAGATC
TTTGATGGACATAATGGGACTGCAGCCGCAGTCTTCTCTAAGGATCATTTACTAAATCAT
GTTTTGAGTGCCATTCCTCATGGACTAGGGAGGGATGAGTGGCTACACGCTTTGCCTCGT
GCACTAGTTGCAGGTTTTGTGAAAACTGATAAGGAGTTCCAGAGGAAAGGGCAAACATCT
GGAACCACAGCTACATTTGTGATTCTAGATGGATGGACTGTGACAGTTGCGTGTGTTGGA
GATTCGCGTTGCATTTTGGATACTCAGGGTGGTGCTGTTTCAGAATTAACTGTAGACCAT
AGGCTTGAAGAAAATGCGGAGGAAAGGGAGCGTGTCACAGCAAGTGGTGGTGAAGTAGGA
AGACTTAGTATATTTGCTGGTACTGAGGTTGGTCCACTTCGTTGTTGGCCAGGAGGTTTA
TGTCTTTCAAGATCAATCGGAGATATGGATGTAGGGGAATTCATTGTTCCAATACCATAT
GTCAAACAAGTAAAACTATCAACTGCAGGTGGAAGGCTAATCATTGCATCTGATGGAATT
TGGGACGCCTTATCGTCAGACATGGCTGCAAAATCTTGTCGCGGCTTGCCTGCTGAGCTT
GCTGCTAGGCAAGTTGTGAAGGAAGCTTTGAGGACGCGTGGGCTGAAGGATGACACGACG
TGCATAGTAGTTGACATAATTCCTCCCGATAGCACTATACGGCCTGCAACTCCGCCCAAG
AAATATAACAAACTCCAATCCCTTTTCTTCAGAAGAAAGTCACAGAAATCTACTGCTAAA
CTATCGAAAAAGCTGTCAGCTATAGGCATTGTAGAGGAATTGTTTGAAGAAGGCTCAGCA
ATGCTTGCTGAAAGATTAGGGAATGAAGATTCAAATGGTCCATCAATGTCCGGTTTCTTC
ATCTGTGCTGTTTGCCAAGTTGATCTTGCTGCAAGCGAAGGCATATCAGTACATGCAGGT
TCAATTTTCTCGACGAGCTCAAAGCCTTGGCAAGGTCCGTTCCTATGTGCTGACTGTCGT
GATAAGAAGGACGCCATGGAAGGAAAACGACCAAGTGGAGTCAAAGTCGCTTAA

Peptide Sequence

PEP ID

XP_016474333.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 3 isoform X2 [Nicotiana tabacum]
Sequence

MKKWRSQLLDMDVQLSPRKIFDGHNGTAAAVFSKDHLLNHVLSAIPHGLGRDEWLHALPR
ALVAGFVKTDKEFQRKGQTSGTTATFVILDGWTVTVACVGDSRCILDTQGGAVSELTVDH
RLEENAEERERVTASGGEVGRLSIFAGTEVGPLRCWPGGLCLSRSIGDMDVGEFIVPIPY
VKQVKLSTAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTT
CIVVDIIPPDSTIRPATPPKKYNKLQSLFFRRKSQKSTAKLSKKLSAIGIVEELFEEGSA
MLAERLGNEDSNGPSMSGFFICAVCQVDLAASEGISVHAGSIFSTSSKPWQGPFLCADCR
DKKDAMEGKRPSGVKVA

Transcript Sequence

Gene sequence data has not been registered.